Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEYELLIREAEPKDAAELVAFLNRVSLETDFTSLDGDGILLTSEEMEIFLNKQASSDNQITLLAFLNGKIAGIVNITADQRKRVRHIGDLFIVIGKRYWNNGLGSLLLEEAIEWAQASGILRRLQLTVQTRNQAAVHLYQKHGFVIEGSQERGAYIEEGKFIDVYLMGKLIG
4R9M Chain:A ((28-190))-AHSVKLRPLEREDLRYVHQLD---SVMRYWFEEP---YE-AFVELSDLYDKHIHDQSERRFVVECDGEKAGLVELVEINH--VHRRAEFQIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRKLGFSVEGELMHEFFIN-GQYRNAIRMCIFQ-


General information:
TITO was launched using:
RESULT:

Template: 4R9M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 652 -96790 -148.45 -604.94
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -148.45
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.542

(partial model without unconserved sides chains):
PDB file : Tito_4R9M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4R9M-query.scw
PDB file : Tito_Scwrl_4R9M.pdb: