Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSDKIGLFTGSFDPMTNGHLDIIERASRLFDKLYVGIFFNPHKQGFLPIENRKRGLEKALGHLENVEVVASHDELVVDVAKRLGATCLVRGLRNASDLQYEASFDYYNHQLSSDIETIYLHSRPEHLYISSSGVRELLKFGQDIACYVPESILEEIRNEKKD
1GN8 Chain:B ((1-159))-MQKRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPSKKPMFTLEERVALAQQATAHLGNVEVVGF-SDLMANFARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAKLA-


General information:
TITO was launched using:
RESULT:

Template: 1GN8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 764 -103278 -135.18 -649.54
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain B : 0.83

3D Compatibility (PKB) : -135.18
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.622

(partial model without unconserved sides chains):
PDB file : Tito_1GN8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GN8-query.scw
PDB file : Tito_Scwrl_1GN8.pdb: