Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKWLQIHITVDQEQVEFTETLLMSLGAVSVTLDDAEDQALLEPLPGETPLWNKVIVTGIYQQDEQDPIDVDTLEAFLKAQLPDVPMRHEELEDQVWERAWMDYYEPIQIGEKFWIVPEWLEPPEADATNIKLDPGLAFGTGNHASTFLCLQWLGKTDVKNKIVIDYGCGSGILGVAALLLGAKKVYATDIDPQAVLATKQNAELNGVLDRLYVGLPEEFDQEFKPQQADVLVANILAGPLMALAPEFAKLLKSDGDFALAGVIEEQVVDVSGVYSEFFDILDVEKREENWCRISGKRKTTN
1UFK Chain:A ((1-254))--MWVYRLKGTLEALDPILPGLFDGGARGLWEREGEVWAFFPAPVDLPY-----------------------------------EGVWEEVGDEDWLEAWRRDLKPALAP-PFVVLAPW-HTWEGAEIPLVIEPG------HHETTRLALKALARHLRPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLEG---SLEAALPFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEEAAEGEWVLLAYGR----


General information:
TITO was launched using:
RESULT:

Template: 1UFK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1319 -132525 -100.47 -534.37
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -100.47
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.453

(partial model without unconserved sides chains):
PDB file : Tito_1UFK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1UFK-query.scw
PDB file : Tito_Scwrl_1UFK.pdb: