Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVNMTRYVLELNKNIRTFLKMQLNPIYYNEQHIAFADNVRRFVQKEMTPFVNEWDEAETFPRELYKKAAEIGLLGLGFSEEYGGIPDADPFYSLLAGIEMAKAGSGGVHISLMV--HTIGAPPIQHFGSEELKARVLPGIISGEKISALAITEPGGGSDVAALQTKAVRDGDYYIVSGEKTFITSGIRADYYTVAVRTDPTKTGAEGISMLLIDAHSEGITK-TPLKKMGWWASDTAHLHFDQVRVPASNLLGKENAGFKVIMNNFNMERFFLGVVAYGYALVCYEEALEWVQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALLEETAWKMTQPKLQGPELVAQISMLKNVATRTMQFCADAAVQTLGGMGFMRGTKSERIYREVKVNMIGGGAEEIMKDLISKQLGY
3R7K Chain:A ((25-402))-----------------------PEAWTTPERRALSQMARSFVEREIAPKLAEWEHVGEIPRDLHLNAAEVGLLGIGFPEEVGGSG-GNAIDSALVTEAILAAGGS-TGVCAALFTHGIALPHIAANGSDALIERYVRPTLAGKMIGSLGVTEPGAGSDVANLRTRAVREGDTYVVNGAKTFITSGVRADFVTTAVRTGGP--GYGGVSLLVIDKNSPGFEVSRRLDKMGWRCSDTAELSFVDVRVPADNLVGAENSGFLQIMQQFQAERLGIAVQAYATAGRALDLAKSWARERETFGRPLTGRQIIRHKLAEMARQVDVACTYTRAVMQRWLA----GEDVVAEVSMAKNTAVYACDYVVNEAVQIFGGMGYMRESEIERHYRDCRILGIGGGTNEIMNEVIAKRIG-


General information:
TITO was launched using:
RESULT:

Template: 3R7K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2066 -63785 -30.87 -170.09
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -30.87
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.547

(partial model without unconserved sides chains):
PDB file : Tito_3R7K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3R7K-query.scw
PDB file : Tito_Scwrl_3R7K.pdb: