Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFQHIPPYAGDPILSLMEQFNADTRSEKVNLSIGLYYN-EDSIVPQLETIIEAQKRIEPKNGKTKLYLPMEGFKPYREAIQALLFGANSPAVKAGR---AVTIQTLGGSGALKVGADFLKTYFPN-SDVWVSQPTWDNHVAIFNGAGIKTHFYPYFDAETRGVDFDGMLSTLKTLPEQSIVLLHPCCHNPTGADLNPAQWDQVIAVLKDRNLIPFLDIAYQGFGDGMEEDAYAIRALDQAGLNFIVSNSFSKIFSLYGERVGGL--TFVCDDAEAAQCTFGQLKATVRRIYSSPPTTGAWLVDEVLNDAELNQQWQGEVKEMRERIIKMRSILKDELTKALPDRDFSYLVNQKGMFSYTGLTAEQVDILREEYAIYLVRSGRICVAGLNMNNVYTVAKAMAEVLAKSVEAA
4RKC Chain:B ((1-397))MFERIDYYAGDPILGLVEKFAADNNPDKVNLGIGI-YYDESGVMPVLDCVKIAEQRIAD-PISPRPYLPMAGLPGHRKGCQELLFGKDA-PVLKDGLVAT--IATIGGSGALKVGAEFIHEW-FPQSKCYVSDPTWGNHIAIFEGCDIEVGKYPYYDTATGGIKFDEMIAFFETLNKDDVLLLHPCCHNPTGVDLTREQWDTVLNVIQERELIPFMDIAYQGFGEDMDSDAYAIRKAVDMGLPLFVSNSFSKNLSLYGERVGGLSVV--CPTVDETERVFGQLNSTVRRIYSSPPSHGGRVVDIVMNDAALHEQWVGEVYAMRDRIKSMRTKLKSVLEAKISGRNFDYLTAQNGMFSFTGLTPEQVERLQSEFGIYMISNSRMCVAGLNSSNIDYVANAMVDVLK------


General information:
TITO was launched using:
RESULT:

Template: 4RKC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2176 -3179 -1.46 -8.15
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain B : 0.84

3D Compatibility (PKB) : -1.46
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.550

(partial model without unconserved sides chains):
PDB file : Tito_4RKC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RKC-query.scw
PDB file : Tito_Scwrl_4RKC.pdb: