Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------------MYSTHRSKTICSKMARAFPGYSVMFFMHKKTLVLLLSTFC--ASTYIHAKTDCYPSSPPVVKQLDQVYYGMNNLRIFYTTSSDNALTFQQDKNLNHIPDYVENIAIQANSIRKAWSVLGYQDPLNSPRYKNDVKYIDIQIQKLNGLGLAYDEPHRHINNPLKKNACALIILISNNIPNLTTNSSLIAHELFHLYTYGYTMFKQPWLTESLAAWSEGIIRKDKLGIYGQRNLPENEEDFEKYVLQRTYRTSQLWNRL------TTLIDRSDGKLFLPLSLMQQKYTDGQPVF---QDKYLKGTLFIRKFLENLGRQDQKISVLNNWNLYHWNEIDQNSAHFNEQILDTL--LITLESTVERNIEKNKFKNLLKKIVKNKKTN-
5BZ1 Chain:A ((3-399))VEISALPLRDLDYIKLATDQFGCRFLQKKLETPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQKLCDYLTAEQKTLLIQTIYPNVFQISI----------NQYGTRSLQKIIDTVDN-EVQIDLIIKGFS-----------QEFTSIEQVVTLINDLNGNHVIQKCIFKF--SPSKFGFIIDAIVEQNNIITISTHKH--GCCVLQKLLSVCTLQQIFKISVKIVQFLPGLIN-DQFGNYIIQFLLDIKELDFYLLAELFNRLSNELCQLSCLKFSSNVVEKFIKKLFRIITGFIVNNVASDDVINASMNILLTTIDIFTVNLNVLIRDNFGNYALQTLLDVKNYSPLLNYGNFCNDFSLKIGNLIVLTKELLPSIKTTSYAKKIKLKVKAYAEAT


General information:
TITO was launched using:
RESULT:

Template: 5BZ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1596 16269 10.19 47.71
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 10.19
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.237

(partial model without unconserved sides chains):
PDB file : Tito_5BZ1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5BZ1-query.scw
PDB file : Tito_Scwrl_5BZ1.pdb: