Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFISFEGTEGVGKTTLIRKIHQHFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMSHDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQCSGRGLSQDKLQLLNQNFV-SRMPEVTFWLDAPIELGMNRARERGALDRFEQEKLSFFTKVREGYETLWKAEPERIKRLDATQSPDQVFEQALQYLA
3HJN Chain:A ((1-189))MFITFEGIDGSGKSTQIQLLAQYLEKRGKKVILKREPGGTETGEKIRKILLEE----EVTPKAELFLFLASRN-LLVTEIKQYLSEGYAVLLDRYTDSSVAYQGFGRNLGKEIVEELNDFATDGLIPDLTFYIDVDVETALKRK---NRFE---KR--EFLERVREGYLVLAREHPERIVVLDGKRSIEEIHRDVVREV-


General information:
TITO was launched using:
RESULT:

Template: 3HJN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 921 -27761 -30.14 -150.06
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -30.14
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.586

(partial model without unconserved sides chains):
PDB file : Tito_3HJN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HJN-query.scw
PDB file : Tito_Scwrl_3HJN.pdb: