Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGHSVALNFADGKTFFISVNKDELLLDAAVRQGINLPLDCREGVCGTCQGQCETGIYEQEYVDEDALSERDLAERKMLACQTRVKSDAAFYFDHDSAICNAGDTLKIETQVTAVELVSETTAILHLDASNHAEQLQFLPGQYARLQIPD--TEDWRSYSFANRPNATNQLQFLIRLLPDGVMSNYLRDRCQVGQSLLIE-APLGSFYLRE--VERPLVFVAGGTGLSAFLGMLDNLVEQPNSPTVQFYYGVNSETDLCEQQRLHAYAEQLPN--------FSYHPIVTKATETWQGK------AGYIHEHLNKDQLAEQAFDMYLCGPPPMIEAVKNWLDEQALQNY-------RIYSEKFLQSNTSR
2QDX Chain:A ((3-256))---------------------------------------------------------------------------------------------------------LYTERVLSVHHWNDTLFSFKTTRN---PGLRFKTGQFVMIGLEVDGRPLMRAYSIASPNY-EEHLEFFSIKVPDGPLTSRLQH-LKEGDELMVSRKPTGTLVHDDLLPGKHLYLLSTGTGMAPFLSVIQDPETYERYEKVILVHGVRWVSELAYADFITKVLPEHEYFGDQVKEKLIYYPLVTREPFRNQGRQTDLMRSGKLFEDIGLPPMNPQDDRAMICGSPSMLEETSAVLDSFGLKISPRMGEPGDYLIERAFVE----


General information:
TITO was launched using:
RESULT:

Template: 2QDX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1209 -14700 -12.16 -64.47
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -12.16
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.425

(partial model without unconserved sides chains):
PDB file : Tito_2QDX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QDX-query.scw
PDB file : Tito_Scwrl_2QDX.pdb: