Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKGQTLQDPFLNSLRKERIPVSIFLVNGIKLQGHIESFDQYVVLLKNTVSQMVYKHAISTVVPARNPRPAGAQGAGFPAQGGSQGGFGGQGAGFGGAQGAGFGGQGGFGGQGGFGGQGGFGGQGGFGGQGGFGGQGGFGGHQGGFGGHQGGFDNDSKFEDGQDDENNR
3GIB Chain:B ((3-65))---GQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSR-------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3GIB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 220 -45083 -204.92 -715.60
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain B : 0.74

3D Compatibility (PKB) : -204.92
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.575

(partial model without unconserved sides chains):
PDB file : Tito_3GIB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GIB-query.scw
PDB file : Tito_Scwrl_3GIB.pdb: