Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNLNLNINQNDVELIPENHPESQEPVVGAEILIEQLYKFYGEVKVLEDLNLHIQPGEFLAIVGRSGCGKSTLLRLIAQLEKASFGEI-------KFKSARHLREGITNDDIRVMFQDPRLLPWRNILQNVQLGLP-------------KSQHALAEELLEKVGLKEKAGQWPSQLSGGQRQRTALARALSHTPRILLLDEPLGALDALTRLEMQSLIERLWKEQGFTAILVTHDVSEAVQLADRIILLDKGQIAQSFQVNLPRPRKKSITFAQLEQQVLDAVLAT
2FGJ Chain:C ((24-223))---------------------------------------------ILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRR-----QVGVVLQDNVLLN-RSIIDNISLANPGMSVEKVIYAAKLAGAHDFISELRE--GYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMRNMHKICK--GRTVIIIAARLS-TVKNADRIIVMEKGKIVE------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2FGJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 794 -1770 -2.23 -9.83
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain C : 0.71

3D Compatibility (PKB) : -2.23
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.453

(partial model without unconserved sides chains):
PDB file : Tito_2FGJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2FGJ-query.scw
PDB file : Tito_Scwrl_2FGJ.pdb: