Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLNVLKHFKEKQMPSFQSADAQINYQTFGEPSSPALVFSNSLGTNYGMWQKQFNELKDQFFVICYDNRGHGSSSTPD--GPYTVEQLGEDVVRLLDHLNISKAAFCGISMGGLTGQWLAIHYPNRFSHVVVANTAAKIGQEQAWLDR-----AKLVRE----QGLQPIATT----AASRWFT-DPFIQ--SHPSIVNNLCNDLSAGSAMG---YANCCEALAKADVR------EQLKDIKIPVLVIAGPQDPVTTVADGEFMQQRIPQSKLAEID-ASHISNVEQPEVFNKILKDFLVN
4INZ Chain:B ((21-304))-------------QYINVNGVNLHYISKG--QGELMLFLHGFPDFSHIWRHQIDEFSNDFHTVALDLRGYNLSEKPSGLESYEIDVLVEDIRQVIEGLGYSSCTLVVHDWGAGIGWTFAYRYPEYVQKLIAFNGPHPYTFMRELRTNKNQQKASEYAKWFQKQEVQDYMERDNFSGLRKLVIDPGVKKGYLTADDVQAYMNSWENGSVLSMLSYYRNLKIFTEEDLRRKSLFPLEEEVLNIPVQIIWGNQDPTFMPENLDGIEEYVPNISVHRLAEASHAPQHEKPQEVNNVMWNFLNK


General information:
TITO was launched using:
RESULT:

Template: 4INZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1334 -39396 -29.53 -153.89
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain B : 0.72

3D Compatibility (PKB) : -29.53
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.408

(partial model without unconserved sides chains):
PDB file : Tito_4INZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4INZ-query.scw
PDB file : Tito_Scwrl_4INZ.pdb: