Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------MKVFDYEDIQLIPNKCIVN-SRSECDTTVTLGKH--TFKMPVVPANMQTIIDETIAEFLAENGYFYIMHR-FDEAARIPFIKKMK---------KRGLITSISVGVKKEEYSFIEKLAEESLNPDYITIDIAHGHANSVIDMIQHIKKYLPETFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAARK---PIIADGGIRTHGDIAKSVRFGATMVMIGSLFAGHEESPGETKVENGIVYKEYFGSASEFQKGEKRNVEGKKIWIQHKGSLKDTLVEMQQDLQSSISYAGGRDLEAIRK-VDYVIVKNSIFNGDTI
1B3O Chain:A ((10-498))TSYVPDDGLTAQQLFNCGDGLTYNDFLILPGYID--FTADQVDLTSALTK-KITLKTPLVSSPMDTVTEAGMAIAMALTGGIGFIHHNCTPEFQANEVRKVKDYPLASKDAKKQLLCGAAIGTHEDDKYRLDLLAQAGV--DVVVLDSSQGNSIFQINMIKYIKDKYPNLQVIGGNVVTAAQAKNLIDAGVDALRVGMG---------------SRPQATAVYKVSEYARRFGVPVIADGGIQNVGHIAKALALGASTVMMGSLLAATTEAPGE-----------------------------------DKGSIHKFVPYLIAGIQHSCQDIGAKSLTQVRAMMYSGELKFEKRTSSAQ


General information:
TITO was launched using:
RESULT:

Template: 1B3O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1538 44465 28.91 164.68
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : 28.91
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.505

(partial model without unconserved sides chains):
PDB file : Tito_1B3O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1B3O-query.scw
PDB file : Tito_Scwrl_1B3O.pdb: