Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTELQDIDFVELSDEEMHLYSRQILLDGWDIEAQEKLKLANVLIVGAGGIGCSSAELLARAGVGKITLIDADTIEISNLQRQIAFGHEDIGRYKAEVLAKRLQKINPYICVEYFNERLDEH-NID-----------KLVEHQDVVLDGCDNFTTRYLVNAACKKHQVALISASAIGF--QAQMFMVEG-DSACYECLFPKEQHANEG---LRCAESGVLATTPVMIASLQAHHTLLYLGLNRTPLKQKLLLWDGLNMTQRIVSFDKDINC--PFCQAS
5IAA Chain:A ((12-264))---------------------------------YEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELAN---LF-FQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESGVSENAVSGHIQLIIPGESACFACAPPLVVAANIDEKT----CAASLPTTMGVVAGILVQNVLKFLLNFGTV--SFYLGYNAMQDFFPTMSMKPNPQCDDRNCRK-


General information:
TITO was launched using:
RESULT:

Template: 5IAA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1115 -111739 -100.21 -522.14
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -100.21
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.408

(partial model without unconserved sides chains):
PDB file : Tito_5IAA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5IAA-query.scw
PDB file : Tito_Scwrl_5IAA.pdb: