Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALRHFLTLRDLSTLELNRILERASELKKMQQSNKVYQPFVGKVLGMIFEKSSTRTRISFEAGINQFGGSAIFLSPRDTQLGRGEPIEDSARVISSMLDIVMIRTFGHDIVERFASYSKVPVINGLTDDHHPCQLLADLQTYIEYRG--SIEGKTVAWIGDGN-NMCNSYIEAAHMMGFKLKIASPKGYEPKPEFLA-------EFGHCVELFDNAEDAAVNADLIVTDVWASMGQEEEQ-KLREKAFADFQVNEKLMGL-AHPDCLFMHCLPA------------------HRGEEISETMLDHKNAVVWDEAENRLHAQKALMEFLLNENLKKA
1DUV Chain:H ((3-332))FYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYASVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMVATLS------


General information:
TITO was launched using:
RESULT:

Template: 1DUV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain H - contact count / total energy / energy per contact / energy per residue : 1597 -16358 -10.24 -54.53
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain H : 0.80

3D Compatibility (PKB) : -10.24
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.563

(partial model without unconserved sides chains):
PDB file : Tito_1DUV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1DUV-query.scw
PDB file : Tito_Scwrl_1DUV.pdb: