Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKLSEMLQETTQFILDKGVKEIDFGLILGSGLGELADEIEDAVMISYDEIPFFPVSTVVGHAGKLVYGSLAGKKVLAMQGRFHYYEGHSMQTVTYPVRVMAGLGAHSVIVTNACGGVNESFVPGDLMLITDHINFT---GENPLIGPNEDAMGPRFPDMSQAYTPDYQATAKAAAEKLGLD--LKEGVYMGYSGPTYETPAEIRMSRTIGADAVGMSTVPEVIVAAHSGLKVLGISCITNLAAGMQ-ANLSHEEVVETTQRVKQSFKALVKETLTLL
3KHS Chain:D ((2-279))--TDYDLAKETAAWLNKQLQIRPVLGIVCGSGLGKIGDSLETSITVAYSDIPNFPVG-------SLIFGSVNGVSCVCMKGRFHLYEGHTAARATFPMRVFKALGVKIVVLTNAAGGLNPSYRPGDFMVVRDHINLPGLAGANPLTGPNDDTEGERFPSMTSVYDKTLRKYAISAARELGMSYATHEGVYCCVNGPSFETPAECKILRLMGSDAVGMSTAPETIVAKHGGMRCLAVSLISNVIASNCE----------AGEEASARMTALVKLVIEKI


General information:
TITO was launched using:
RESULT:

Template: 3KHS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1426 -136594 -95.79 -539.90
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain D : 0.81

3D Compatibility (PKB) : -95.79
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.598

(partial model without unconserved sides chains):
PDB file : Tito_3KHS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KHS-query.scw
PDB file : Tito_Scwrl_3KHS.pdb: