Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKADTIFKENIERILKEGVFSEQARPKYKDGTVANSKYVTGAFSEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKK--------HDIINKLLKQLETNPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDGTNFFDIKAEDFELVDYDPVKPQLKFDLAI
4FOX Chain:D ((1-263))----MTPYEDLLRFVLETGTPKSDRT-----GT--GTRSLFGQQMRYDLSAG-FPLLTTKKVHFKSVAYELLWFLRGDS-NIGWLH-EHGVTIWDEWASD-TGELGPIYGVQWRSWPAPSGEHIDQISAALDLLRTDPDSRRIIVSAWNVG-EIERMALPPCHAFFQFYVA--D--GRLSCQLYQRSADLFLGVPFNIASYALLTHMMAAQAGLSVGEFIWTGGDCHIYDNHVEQVRLQLSREPRPY-PKLLLAD--RDSIFEYTYEDIVVKNYDP-HPAIKAPVAV


General information:
TITO was launched using:
RESULT:

Template: 4FOX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1264 -59453 -47.04 -233.15
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain D : 0.73

3D Compatibility (PKB) : -47.04
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.459

(partial model without unconserved sides chains):
PDB file : Tito_4FOX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FOX-query.scw
PDB file : Tito_Scwrl_4FOX.pdb: