Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTIEPGQRIALVGQSGSGKSTLSKIPSGLYKIDTGKVLFDGVNINQIDKKILSQNLGVVPQDSFLLNRSILDNITL-KHEVTSQKIEEVCKAVQIYDEIMAMPMKFNTIISEMGSNISGGQRQRIALARALINNPSIVILDEATSALDTINEERITKYIKSQGCTQII--VAHRLSTIKDADIIVVMKGGKIVESGNHKYLMDLGGEYYSLYTKRK
4PL0 Chain:B ((371-573))-----GKMYSLTGPSGSGKSTLVKIISGYYKNYFGDIYLNDISLRNISDEDLNDAIYYLTQDDYIFMDTLRFNLRLANYDASENEIFKVLKLANL-SVVNNEPVSLDTHLINRGNNYSGGQKQRISLARLFLRKPAIIIIDEATSALDYINESEILSSIRTHFPDALIINISHRINLLECSDCVYVLNEGNIVASGHFRDLM-VSNEYIS------


General information:
TITO was launched using:
RESULT:

Template: 4PL0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 882 -29036 -32.92 -145.18
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain B : 0.80

3D Compatibility (PKB) : -32.92
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.406

(partial model without unconserved sides chains):
PDB file : Tito_4PL0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PL0-query.scw
PDB file : Tito_Scwrl_4PL0.pdb: