Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTETTIQGLAASLNPARAARKIIGFVPTMGNLHEGHLTLVREAKKLCDVVVVSIFVNPTQFGPGEDFDNYPRTLEQDSRLLADVGCDIIFAPSVEQMYGTQPR-LTNISVSQITDDLCGSSRPGHFDGVALVVTKLFNIVQPNYAFFGQKDYQQLAVIRQFVQDLNIPLEVIGVPIVRAEDGLALSSRNGYLTPEQRQVAPVIYQGLKQAEEQLHQGKD-LQQVLADLKTLLTDNGFVVDYVEARQPNLLAASQ-FDRDIVLFVAAKLGGTRLIDNLQVAFTPQ
3Q12 Chain:B ((4-285))MLIIETLPLLRQQIRRWRQEGKRIALVPTMGNLHEGHMTLVDEAKTRADVVVVTIFVNPLQFERPDDLAHYPRTLQEDCEKLTRHGADLVFAPAAADIYPAGLEKQTYVDVPALSTILEGASRPGHFRGVSTIVSKLFNLIQPDVACFGEKDYQQLALIRKMVADMGYDINIVGVPTVRAKDGLALSSRNGYLTEEERQIAPQLSKIMWALAEKMALGERQIDALLEEAAAQLLRVGFTPDELFIRDAETLQPLTVDSQQAVILMAAWLGKARLIDNQLVDL---


General information:
TITO was launched using:
RESULT:

Template: 3Q12.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1396 -86137 -61.70 -308.73
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain B : 0.83

3D Compatibility (PKB) : -61.70
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.637

(partial model without unconserved sides chains):
PDB file : Tito_3Q12.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3Q12-query.scw
PDB file : Tito_Scwrl_3Q12.pdb: