Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQHLSLPKDKIRFLLLEGVHQNAVDTLNAAGYTNIDYRKTALEGEALKEAIKDAHFIGIRSRTQLTEEVFEAANKLIAVGCFCIGTNQVDLKAAMARGIPVFNAPYSNTRSVAELVLAETILLLRRVPEKSAACHRGGWDKSAVGSFETRGKTLGIVGYGSIGSQLSVLAESMGMNVIYYDAVTKLPMG-NARQVGSLDELLATADVVTLHIPDVPSTRNFFTKEQFAKMK-EGA----IFLNAARGTCVVIEDLADAIKSGHLAGAAVDVFPKEPKANGEEFQSPLRGLDNVILTPHVGGSTMEAQANIGLEVAEKFVAYSDKGMTLSAVNFPEIALPLTAGQHRLLHIHKNVPGVLSKINNLFAEQGINISGQSLMTKGDIGYLVMDVDASASQEALDMLHEVEGTIRVRVLF
5TSD Chain:A ((100-285))-----------------------------------------------------------------------------------------------------------SLTTRMSEWVVMQCLMHLRGQYGHDSHQRRREWAK--LIAPEAAEVTVGVMGLGILGQDAVAKLKVMGFNVIGWSRTRKTIEGVETFDAGELDRFLAKTDILVGLLPLTPETTGFYDSELFKKLRRDGALGQPVFINAGRGKSQIETDIVSAVREGTLGGASLDVFEVEPLAT----DSPLWELENVFITPH---------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5TSD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 893 -44102 -49.39 -245.01
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -49.39
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.595

(partial model without unconserved sides chains):
PDB file : Tito_5TSD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5TSD-query.scw
PDB file : Tito_Scwrl_5TSD.pdb: