Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKPIIAGNWKMNKTASEAKEFAEAVKNKIPSNDKVDSVIGSPALFL---QELMTSAEGTELKISAQNCYWENSGAFTGETSPAALADLGVHYVIIGHSERREYFHETDEDINKKAKAIFANGMTPILCCGESLETYEAGKTAEWIEGQITAGLADLSAEQVSNMVIAYEPIWAIGTGKSADAQIADEICGVVRQTVEKLYGKEVSEAVRIQYGGSVKPENIAEYMAKENVDGALVGGASLQADSFLSLLDAVK
1M7P Chain:B ((3-246))-RKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHYDHTRKLLQSKFSTGI----QNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQNKTIEVITKQVKA-FVDL-IDNFDNVILVYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLK-ESFVDIIKS--


General information:
TITO was launched using:
RESULT:

Template: 1M7P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1236 -5060 -4.09 -20.99
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain B : 0.81

3D Compatibility (PKB) : -4.09
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.489

(partial model without unconserved sides chains):
PDB file : Tito_1M7P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1M7P-query.scw
PDB file : Tito_Scwrl_1M7P.pdb: