Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEQTFFIIKPDGVKRGLVGEVLKRIEQRGFTIEKLEFRSQVSEELIDQHYQDLVGQSFYPPIREFMTSGPVLVGVISGPKVIETWRTMMGATRPEEALPGTIRGDFAKAAGENEIIQNVVHGSDSEESAKREIALWF
4FKY Chain:C ((12-141))-ERTFIAVKPDGVQRNLVGEIIKRFENKGYKLVGLKLL-QPTEEQAKQHYIDLASKPFYSGLVSYFSSGPIVGMVWEGLGVVKGGRVLLGATNPADSLPGTIRGDFAVDVG-----RNVCHGSDSVESAKREIAFWF


General information:
TITO was launched using:
RESULT:

Template: 4FKY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 622 -63494 -102.08 -488.42
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain C : 0.85

3D Compatibility (PKB) : -102.08
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.545

(partial model without unconserved sides chains):
PDB file : Tito_4FKY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FKY-query.scw
PDB file : Tito_Scwrl_4FKY.pdb: