Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMILFGKKKVKPSQKAYAVVTGAGSGIGRSFAIELAKRGGSVVCADINLEAAEETVTLLEQQGAKAFAMHCDVGDPEHVTNLAETAEILLSHPVTLVINNAGVGLGGKFDELSLEDWNWVMNINLWGVIHGCHAFVPKFKKL-GYGAIINVASAASYTAAPEMTAYNVTKAGVRALSETLSAELRKFN--IKVNVLCPTLVPTNIIKNGRIPGRYS----KL---------ADHALMNYALTTSDDVAKLTLNRLDQDELYTIPQIDAKLFWLMKRASPSLYTKFLGTSYKLFK
5IG2 Chain:B ((9-263))--------MFEFDGKVAVITGAGSGFGRAFAEKGASLGMKLVLADVDEGALARTVDTLRAAGAEVIGVRTDVSNGAQVQALADAALEAFGK-VHLLFNNAGVGAGGFLWESSANDWAWVFGVNVMGVAHGVRVFAPIMLGQNEAAHIVNTASVAGLLSPPSMGIYNASKHAVVSLTETLYHDLRNAGGEVGCSLLCPAFVPTGIADAERVRPEALRNEAQPTRSQLAADRQLQRAVRSGKLGATDVATLTFEAIAERRFYILTH-----------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1342 -93592 -69.74 -391.60
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain B : 0.75

3D Compatibility (PKB) : -69.74
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.572

(partial model without unconserved sides chains):
PDB file : Tito_5IG2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5IG2-query.scw
PDB file : Tito_Scwrl_5IG2.pdb: