Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLNVLKHFKEKQMPSFQSADAQINYQTFGEPSSPALVFSNSLGTNYGMWQKQFNELK-DQFFVICYDNRGHGSSSTPD-GPYTVEQLGEDVVRLLDHLNISKAAFCGISMGGLTGQWLAIHYPNRFSHVVVANTAAKIGQEQAWLDRAKLVREQGLQPIATTAASRWFTD--PFIQ--SHPSIVNNLCNDLSAGSAMGYANCCEALA--KADVREQLKDIKIPVLVIAGPQDPVTTVADGEFMQQRIPQSKLAEID-ASHISNVEQPEVFNKILKDFLVN
5A62 Chain:A ((7-268))----------------PSNSVSTYYEDHGDARSYPLVLIHPIGGNILIWDYEIQLLLKSGFRVIAYELRGHHRTNMGKTGAYTMQDLIDDLRRLLEHLNIGKCTIIGHSIGGIISSMYAAQHPGKVDAIIMINGSPKKFQEKDLEKHFRT-REVAITQGMKALAEHKLVSLDEARDLFADKRHADFFREVFTKTSVEGFVAATVALYTIPGNVVQGLRASGCKVFAIVGSDDDVFM-RLIKETKEEIPEMELRVLQGSDHWVVIEKPKEMYDILMGFLAI


General information:
TITO was launched using:
RESULT:

Template: 5A62.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1388 -16553 -11.93 -65.43
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -11.93
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.486

(partial model without unconserved sides chains):
PDB file : Tito_5A62.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5A62-query.scw
PDB file : Tito_Scwrl_5A62.pdb: