Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRLATRFEKLQSQQRKALVSYVMAGDPQPQVTVPLLHKMVAAGVDVIELGLPFSDPMADGPVIALAAERALAAGTNTLDALNMVKEFREQDQETPVVLMGYLNPVEVIGYEKFVSYAKQCGVDGLLLVDLPPEESKEFGAILKQHDMDQIFLLAPTSTDQRIQHVANQASGFIYYVSLKGVTGAATLDTSEAAARIEKIKGMTNVPVGVGFGISDAASAKAMGSVADAVIVGSAFVKSFATLAADEAVEQTVNKVKELRAALDELV
5TCH Chain:E ((10-265))-SRLGPVFDSCRANNRAALIGYLPTGYPDVPASVAAMTALVESGCDIIEVGVPYSDPVMDGPTIARATEAALRGGVRVRDTLAAVEAISIA--GGRAVVMTYWNPVLRYGVDAFARDLAAAGGLGLITPDLIPDEAQQWLAASEEHRLDRIFLVAPSSTPERLAATVEASRGFVYAAS-----------SQAAPELVGRVKAVSDIPVGVGLGVRSRAQAAQIAQYADGVIVGSALVTALTE-----GLPRLRALTGELAAGVR---


General information:
TITO was launched using:
RESULT:

Template: 5TCH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 1425 -198837 -139.53 -811.58
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain E : 0.79

3D Compatibility (PKB) : -139.53
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.646

(partial model without unconserved sides chains):
PDB file : Tito_5TCH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5TCH-query.scw
PDB file : Tito_Scwrl_5TCH.pdb: