Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFISFEGTEGVGKTTLIRKIHQHFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMSHDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQCSGRGLSQDKLQLLNQNFV-SRMPEVTFWLDAPIELGMNRARERGALDRFEQEKLSFFTKVREGYETLWKAEPERIKRLDATQSPDQVFEQALQYLA
5H56 Chain:B ((1-189))MLIAFEGIDGSGKTTQAKKLYEYLKQKGYFVSLYREPGGTKVGEVLREILLTE----ELDERTELLLFEASRSKLIEEKIIPDLKRDKVVILDRFVLSTIAYQGYGKGLDVEFIKNLNEFATRGVKPDITLLLDIPVDIALRRLKEKNRFE---NK--EFLEKVRKGFLELAKEE-ENVVVIDASGEEEEVFKEILRAL-


General information:
TITO was launched using:
RESULT:

Template: 5H56.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 919 -35529 -38.66 -188.98
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain B : 0.81

3D Compatibility (PKB) : -38.66
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.588

(partial model without unconserved sides chains):
PDB file : Tito_5H56.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5H56-query.scw
PDB file : Tito_Scwrl_5H56.pdb: