Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIGGKNMDKDYILKVKGLYHQFLLGNNKTLQVLKNVSLSASRGEFISILGISGSGKSTLLKCISSLLEPTSGEVILNG--INPYKIRNAKLSSIRRNEVSFIFQAYNLIPSLPVI-----ENIALPLRL-----SQKKLTIKNVENLLKRMKFNAG--LNDFVGTLSGGEQQKVAIARAVIADSDIIFADEPTGALDSVSREVIFELLRELVGAGKCVIMVTHDIELASKTDRALILKDGKIFKELHRPSGEELYKILEVQSTTEE
4HLU Chain:D ((26-217))-------------------------------VLKDVNAEFETGKIYVVVGKNGSGKTTLLKILAGLL-AAAGEIFLDGSPADPF---------LLRKNVGYVFQN----PSSQIIGATVEEDVAFSLEIMGLDESEMRKRIKKVLELVGLSGLAAADPLN-----LSGGQKQRLAIASMLARDTRFLALDEPVSMLDPPSQREIFQVLESLKNEGKGIILVTHELEYLDDMDFILHISNGTI------------------------


General information:
TITO was launched using:
RESULT:

Template: 4HLU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 815 -25457 -31.24 -143.02
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain D : 0.74

3D Compatibility (PKB) : -31.24
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.520

(partial model without unconserved sides chains):
PDB file : Tito_4HLU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HLU-query.scw
PDB file : Tito_Scwrl_4HLU.pdb: