Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQDTPLIIGSRSFQSRLLVGTGKYKDLNETDLAIQASGAEIVTVAIRRVNIGQNPDQPNLLSVIPPEKYTILPNTAGCFDADSAVRTCMLARALLDGHNLVKLEVLGDE---KTLYPNVTETLKAARTLIDDGFEIMVYTSD--D---P-IIAQELESMGCVAIMPLGSLIGSGLGILNPHTISIIKENAKVPVLVDAGVGT-A----SDAAIAMELGCDGVLMNTAIAAAQNPILMASAMKKAVEAGREAFLAGRMPRKRMANASSPETGYFFK
3GLC Chain:C ((138-284))------------------------------------------------------------------------------------------------NSCAVAAQVYIGSEYEHQSIKNIIQLVDAGM---KVGMPTMAVTGVVRDQRYFSLATRIAAEMGAQIIKTY-Y--V-------EKGFERIVAGCPVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQSDHPVAMMKAVQAVVHHNETAD-----------------------


General information:
TITO was launched using:
RESULT:

Template: 3GLC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 561 -20265 -36.12 -157.09
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain C : 0.59

3D Compatibility (PKB) : -36.12
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.573

(partial model without unconserved sides chains):
PDB file : Tito_3GLC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GLC-query.scw
PDB file : Tito_Scwrl_3GLC.pdb: