Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRIILLGPPGAGKGTQAQLICKRYNIPQISTGDMLRAAIREGTELGLKAKSVMESGGLVSDELIIGLVKERIAQPDCVNGCIFDGFPRTIPQAEALEKEGISIDHVIEIDVPDEEIVKRLSGRRQHPASGRVYHVVYNPPKVEGKDDETGEDLVQRPDDQEETIRKRLASYHTETEQLVGFYQGR-----AASGENAPTYDKLDGLRTIEDVQKDLFNILDK
4JZK Chain:A ((1-214))MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEAGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKY-------AKVDGTKPVAEVRADLEKILG-


General information:
TITO was launched using:
RESULT:

Template: 4JZK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 999 -47811 -47.86 -228.76
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.88

3D Compatibility (PKB) : -47.86
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.88
QMean score : 0.584

(partial model without unconserved sides chains):
PDB file : Tito_4JZK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JZK-query.scw
PDB file : Tito_Scwrl_4JZK.pdb: