Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQFRKTLNIGIMLKIVLSEIGMTQGLLAGKRFLTAGVASKL--SIAYGIAQALHREGAELAFTYPNEKLKKRVDEFAEQFGSKLVFPCDVAVDAEIDNAFAELAKHWDGVDGVVHSIGFAPAHTLDGDFTDVTDRDGFKIAHDISAYSFVAMARAAKPLLQARQGCLLTLTYQGSERVMPNYNVMGMAKASLEAGVRYLASSLGVDGIRVNAISAGPIRTLAASGIKSFRKMLDANEKVAPLKRNVTIEEVGNAALFLCSPWASGITGEILYVDAGFNTVGMSQSMMDDE
4ZJU Chain:A ((11-270))-----------------------QGLLAGKRFLIAGV--ASKLSIAYGIAQALHREGAELAFTYPNEKLKKRVDEFAEQFGSKLVFPCDVAVDAEIDNAFAELAKHWDGVDGVVHSIGFAPAHTLDGDFTDVTDRDGFKIAHDISAYSFVAMARAAKPLLQARQGCLLTLTYQGSERVMPNYNVMGMAKASLEAGVRYLASSLGVDGIRVNAISAGPIRTLAASGIKSFRKMLDANEKVAPLKRNVTIEEVGNAALFLCSPWASGITGEILYVDAGFNTVGMSQS-----


General information:
TITO was launched using:
RESULT:

Template: 4ZJU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1403 -31394 -22.38 -121.68
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.93

3D Compatibility (PKB) : -22.38
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.93
QMean score : 0.588

(partial model without unconserved sides chains):
PDB file : Tito_4ZJU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZJU-query.scw
PDB file : Tito_Scwrl_4ZJU.pdb: