Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQLISLPKQILQCGQLQLDLSQPHVMGILNVTPDSFSDGGKHNQLDQAVDHALSMIEQGATIIDIGGESTRPGASEVAVEEEVRRVVPVVEALSHHNVILSIDTSQPEVIRAAKAAGAHIWNDVRALTGPNALKTAVELDIPVVIMHMRG-EPTTMNQLDQYTDVTLDVMQELQQRIDEALAAGVKKHNIIVDPGFGFAKNAQQNLKLLKEFWKLNELGYPILSGLSRKRFIGEALQGAP-ADQRAVGSVTGHLLSIQQGASIVRAHDVKEMHEAILVWKAMQQA
2DZA Chain:B ((20-286))-------------RDRALDLDRVRLLGVLNLTPDS------------ALERAREMVAEGADILDLGAESTRP---PVPVEEEKRRLLPVLEAVLSLGVPVSVDTRKPEVAEEALKLGAHLLNDVTGLRDERMVALAARHGVAAVVMHMPVPDPATMMAHARYRDVVAEVKAFLEAQARRALSAGVP--QVVLDPGFGFGKLLEHNLALLRRLDEIVALGHPVLVGLSRKRTIGELSGV-EDPAQRVHGSVAAHLFAVMKGVRLLRVHDVRAHREALGVWEALY--


General information:
TITO was launched using:
RESULT:

Template: 2DZA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1390 -77828 -55.99 -311.31
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain B : 0.79

3D Compatibility (PKB) : -55.99
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.548

(partial model without unconserved sides chains):
PDB file : Tito_2DZA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2DZA-query.scw
PDB file : Tito_Scwrl_2DZA.pdb: