Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSEEVGIILREAVPGDAKDILLMMGQVNKE-TEFLVLDEAELLLPPETLEEELDYIYE---SNNNLLLLAIYEGTIIGTASVKADSQFRLSHVGEVGISILQEYWGMGLGTLMLEEIISWAKEMGVLFRLELDVQVRNERAVHLYRKMGFQIEAVMPRGARTDLGEFLDVYKMSYLIE
3R9F Chain:B ((18-187))--VNDEITLLYPALKYAEELYLLINQNKINFIKSMAWPA--FVNNISDSVSFIEQSMIDNQNEKALILFIKYKTKIAGVVSFNIIDH--ANKTAYIGYWLGANFQGKGIVTNAINKLIQEYGDSGVIKRFVIKCIVDNKKSNATALRCGFTLEGVLQKAEIL-NGVSYDQNIYSKVI-


General information:
TITO was launched using:
RESULT:

Template: 3R9F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 714 -42323 -59.28 -254.96
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain B : 0.67

3D Compatibility (PKB) : -59.28
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.473

(partial model without unconserved sides chains):
PDB file : Tito_3R9F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3R9F-query.scw
PDB file : Tito_Scwrl_3R9F.pdb: