Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKILTMKKVTKTFGSGHTKVSALKAIDFYVKEGEFVSIIGPSGSGKSTFLTISGGLQTPTSGEIVINGHSLTEL-PEKKRADLRFKEIGFILQSSNLIPFLTVKEQFELVDQVTSKKEDSTKIDSLLQSLD-IQSLKNSYP-------KDLSGGERQRVAIARALYNEPSLILADEPTASLDTDHAYEVVKLLVKEAHE--KQKATIMVTHDVRMIQWSDRVYRMEDGYLTEEEKKKE
1XEF Chain:B ((19-223))-----------------------LDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLR-----RQVGVVLQD-NVLLNRSIIDNISLANPGMSV-EKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALD----YESEHVIMRNMHKICKGRTVIIIAARLSTVKNADRIIVMEKGKIVEQGKHKE


General information:
TITO was launched using:
RESULT:

Template: 1XEF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 904 10181 11.26 52.48
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : 11.26
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.483

(partial model without unconserved sides chains):
PDB file : Tito_1XEF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1XEF-query.scw
PDB file : Tito_Scwrl_1XEF.pdb: