Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNPATQDAAAAEEESPVVCTAKKYIFDLHSYAWKESDCLIRIPRPHKGMGHGGMRVCYAVEDVDEEGAGTPMVAKMF--RRNISDVVEKDYFNEGAAQCMCEEFANNFNRIHLTNIHKPNISFLQCYVVRIPRDS------IPVASQKKRTGFFSYKTQDTGEVMFVMEPMLSGKFTKYNSNYGETYREDKKAALTSSEAKRRTEVFEAAEAFSHFTLVESGGSMLVCDLQGVND----FLTDPQIHTEDGKGLGMG--NMGQEGIDKWIEKHECNEICRALGLQPLLGAVPSSTACAKEENLNLGLRAQLQSQNPVRLRDLVPLTKPLEEMTEAERIEYALKVSRLTD
4NL0 Chain:A ((66-264))---------------------------------------------------GGERLAFRAIN----GRGDRIVLKRFFQQRPLTMLLETI-----ERQLICIYLANIFNKL---NVSPNKLHFLPNYLF-IPSPTKDLDGKILTLEQTEQAVAATCRTPN------FVEPYLSGYFIKYIDNNGWI---------------NESEFHSTLHAFAHWTWVHTKGALLICDIQGVNANNKFYLTDPALHHIDQNKFIYSETNLGEVGISQFFRTHQCNAICQGLHL-----------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4NL0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 798 -13318 -16.69 -71.99
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -16.69
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.379

(partial model without unconserved sides chains):
PDB file : Tito_4NL0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NL0-query.scw
PDB file : Tito_Scwrl_4NL0.pdb: