Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSIKKRGLAKGRGLDALLGSIQKEKLQLEAQALDHGQLKQIDVKLLKRGEYQPRRFIHEHDLQELASSIEKHGVM-QPIVIRPVDDEAHPYEIIAGERRWRAAQIAGLTEIPAIVRD-LNDQVAIAL----------ALIENIQRQDLNPIDQ------------ALAL---QRFHDEFGLSHQEIADTVGKARTTVSNL-LRLLSLADDIKEFMQQGQLDMGHARAILTLKGKEQLEVAKIVIEKGLSVRQTEQLVRDWNEPKQEKEKAPVAPDIEQLTQKLSERFGANVKIDHNQKGKGKLVIHYHSLDELDGILNICLPD
5X0K Chain:A ((14-204))--------------------------------------KKVDYVFIELDKMKPHQQLVQKELEAFIESVTGSGIFWKPMLLAKVPGEDM-YLIVDGHHRWAGLQKLGAKRAPSVILDYFSDDVKVYTWYPAFKGDLNEVVERLKKEGLEVIEDPEAEEKAERGEIAFALVGEKSFAIPGGLEEQKKVSKVLDEMSVEGKIELIYYGLKEDAREDMAKGEIDYVFIRKAPT---------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5X0K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 597 -28269 -47.35 -173.43
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -47.35
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.275

(partial model without unconserved sides chains):
PDB file : Tito_5X0K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5X0K-query.scw
PDB file : Tito_Scwrl_5X0K.pdb: