Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNAPVNVQQELMPVPASMREIDRKRYLWMISPALPVIGLGILAGYHFGPCPLKKVFALGGPLLLHVVIPAIDTIIGKDARNPTDEEIKLLEKDPYYSRLVKSFIPLQYAANIYACYLTSRKDTSFLDKILLGISMGAINGIAINTAHELSHKHDRIDHILSHLALVPTGYNHFRIEHPYGHHKRAATPEDPASSRMGETFYEFWPRTVIGSFKSAIEIEKNRLKRKGKEFWSLDNELLQGWGMSAAFHASMVGIFGKGTIPYLATQAFYGISLFEIINYIEHYGLLRQNKENGQYERTMPEHSWNNNNVVTNLFLYQLQRHSDHHAYPTRPFQALRHFDEAPELPSGYASMLLPAMIPSWWFKMMDKRVFDHYKGDLNKANISPKRRAKIFKKFGVVDKSLEATQAE
4JIX Chain:B ((66-78))---------------------------------------------------------------------------------------------------------------------------------------------HYIILHELIHFKI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4JIX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1 47 46.50 3.58
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain B : 0.49

3D Compatibility (PKB) : 46.50
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.49
QMean score : 0.689

(partial model without unconserved sides chains):
PDB file : Tito_4JIX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JIX-query.scw
PDB file : Tito_Scwrl_4JIX.pdb: