Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTTRIYVRASTKDQDAERALADLKNFALSIKGDFNEYIENESGTKLDRPVLNQLLDDSSNGDTLLVESVDRLSRLSQNDFEVLKGRIKDKGLKLVVADLPTTHMLVNSADNITSSILSLVNNMLIDLLATMARLDNDKRRERIKQGLERSGYKPT--GKKADTAKHTRIKELNNKGLTKEEIAKAVGCGVATVYRVIKK
5CY1 Chain:A ((6-180))-----YARVSTSQQSLDIQIRALKDAGVKANRIFTD---KAS---TDREGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIK-EFDAQGVAVRFID-----------DGISTD--GDMGQMVVTILSAVAQAERRRILERTNEGRQEAKLKGIKFGRRR-TVDRNVVLTLHQKGTGATEIAHQLSIARSTVYKILE-


General information:
TITO was launched using:
RESULT:

Template: 5CY1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 524 -17102 -32.64 -100.60
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -32.64
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.534

(partial model without unconserved sides chains):
PDB file : Tito_5CY1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5CY1-query.scw
PDB file : Tito_Scwrl_5CY1.pdb: