Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTTQNLMCPVCRQRLELVSKTWRCEQGHSYDIAKQGYVNLHVVQHKHSKNPGDTPESVDARRAFLQGGYYQPLQQAVVHLLKDLQAKMVLDIGCGEGYYTSAM-QQVVEQCIGVDIAKNAVQRA----AKLNDKVTWVVGTGATLPVIDQSMDVCTS--LFSPIPQTEILR--------VVKDDGYLIVVTSATDHLYAMREALFEQVNPHIPQKFVEQLQDLFELKEQQVIDAPLVLDQQALKNLIAMTPYAYKASPERRMQLEQKAHLQVTASFQIYLFQKRNKKAI
5JE2 Chain:A ((31-150))--------------------------------------------------------------------------RTIFHMIGDVSGKSVLDLACGFGFFGREIYRRGAAKVVGVDISEKMIELAREESRKYGDPLEFHVRDVANMEPLGQ-FDLVNAAWLFNYADSVENLRKMFKVVRASLKPDGKLVAYTVDPD----------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5JE2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 478 -24516 -51.29 -233.49
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -51.29
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.488

(partial model without unconserved sides chains):
PDB file : Tito_5JE2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5JE2-query.scw
PDB file : Tito_Scwrl_5JE2.pdb: