Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPIEFIATSKLPTAFGEFNISVFQDPVTGEEHVALSKGLENP----PTDPVLVRVHSECLTGDAFASLK---CDCGPQLQATQKLINEAGQGVILYLRQEGRGIGLTNKIRAYALQDQGHDTVDANLLLNLPADARRYDMCSIMLDHLKVKEVKLITNNPLKIQALKDQGINVVDRVPLTVGRNPFNEQYLKTKRERMAHLYQKDDF
5HKO Chain:A ((153-239))---------------GKGNIVILQGPLGGSGEINRGKGIDQVLAKYPDIKVLAKDTANWKRDEAVNKMKNWISSFGPQIDGVVAQNDDMGLGALQALKEAGR---------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5HKO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 314 12392 39.46 154.89
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : 39.46
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.445

(partial model without unconserved sides chains):
PDB file : Tito_5HKO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HKO-query.scw
PDB file : Tito_Scwrl_5HKO.pdb: