Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMNSSTEQIISNSLSLRLKQETAAEHERMHQLMSE---AKVFSSKEKYAQFTLSQYYFQLEIEHLFEKEGV-AGLIPD-L-DIRGRSKQALADLNDL-GIQPNGQ----Q---------LQSENVQLPEALGWIYVSE-GSTLGAAFLFKEAQKHLGFS-ETFAARNLAAYPEGRAKVWKR-FVKALDEAGFDQTQQDRVVQGALDAFGYFGQALDQLDELK
2RGZ Chain:B ((30-238))----------MADLSELLKEGTKEAHDRAENTQFVKDFLKGNIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGENWEEQVQAPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPSTGEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFNELD---


General information:
TITO was launched using:
RESULT:

Template: 2RGZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 679 50481 74.35 271.40
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain B : 0.63

3D Compatibility (PKB) : 74.35
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.390

(partial model without unconserved sides chains):
PDB file : Tito_2RGZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2RGZ-query.scw
PDB file : Tito_Scwrl_2RGZ.pdb: