Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTQYFFLFPKIDQKKNGLVFALLKRAKILNEQLGISPTIITTEYDRSLAENYWSLIATNLAPPSIGYLNLYADFQGTHLKLANKKIHDPAIEMFNSNILKTIIPFTYNQRFHDKNNKNYLYEIRQNDSITLRYVNTFKKGVKTGRIIYDSYGYLSCIQVINPENQMIITETYYHTEGYPVIIKNYQLNEKNKNIVSNIFLFNKQGVINEVFETESQLIQYWFLKISQLYENDLMYILIDRAIHFYEPLREIKQENMRFIGTIHATHLNGHDIQNSTINRHYRSYFKYSNELDALVILTERQKQHIQQRFGMEEKLFVIPHIYEKTIDHVNFSNRDPMFCLTIARYDKAKNLDSLIRIFKKVVEVIPNAYLNIYGFGSEHNFLQSQIDEHQLNNHIKLMGYNENTDALYNKASLFLFSSRSEGFGMAVLEALCHGCPVVSYDIDYGPSDMIKHDENGYLVTFQDEESFAQKVVSLLKDEHKRLKLSENAYACIQLTDQKQFALKWQELFQAIQ
5D00 Chain:A ((200-342))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DEKVVIHVSNFRKVKRVQDVIRVFRNIAGKT-KAKLLLVGDGPEKSTACELIRKYGLEDQVLMLGNQDRVEDLYSISDLKLLLSEKESFGLVLLEAMACGVPCIGTNIG-GIPEVIKNNVSGFLVDVGDVTAATARAMSILEDEQ---------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5D00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 753 -112177 -148.97 -784.45
target 2D structure prediction score : 0.78
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -148.97
2D Compatibility (Sec. Struct. Predict.) : 0.78
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.603

(partial model without unconserved sides chains):
PDB file : Tito_5D00.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5D00-query.scw
PDB file : Tito_Scwrl_5D00.pdb: