Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MSFTRINGVLHAEQCSLEQLAQQFGTPLYVYSKAAFEKHYLDMDRAFDFIDHQICFAVKSNSNIAVLNVLAKLGAGFDIVSGGELARVLKAGGDASK----IVFSGLGKTEADIETSLNVGIACFNVESYAELDRIQKVAARLGKKAPISLRVNPDVDAKTHPYISTGLKENKFGIPSDAVYETYQYAASLP---------NLEIVGIDCHIGSQLTETKPFVDALDRVI-VMIDELKKLGINLKHIDIGGGLGVCYKD-ETPPSVEEYANSMKPALEKLG------LKVYMEPGRSISANAGVLLTKVDLLKPTTHRNFAIIDAAMNDLIRPALYEAWMDIQPVVP--RTDTEEKTWDLV--GAICETGDFI-----GKDRSLALQE---NDLLTVLGAGAYGFVMSSNYNTRGRAAEVMVSGEKSYLIRERETVESLWEKERLLPEE 1KNW Chain:A ((16-411)) ---------------NLLRLPAEFGCPVWVYDAQIIRRQIAAL-KQFDVVR----FAQKACSNIHILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPV-NAGSVDMLDQLGQVSP--GHR--VWLRVNPGFGHGHSQKTNTGGENSKHGI----------WYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYAH-----LEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI-------------

General information: TITO was launched using: RESULT: Template: 1KNW.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2018 -6013 -2.98 -16.56 target 2D structure prediction score : 0.61 Monomeric hydrophicity matching model chain A : 0.78 3D Compatibility (PKB) : -2.98 2D Compatibility (Sec. Struct. Predict.) : 0.61 1D Compatibility (Hydrophobicity) : 0.78 QMean score : 0.509

(partial model without unconserved sides chains): PDB file : Tito_1KNW.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1KNW-query.scw PDB file : Tito_Scwrl_1KNW.pdb: