Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEKNCGSGQSKLKALRMHIYFEVDFQEQAQHYQAVLHSRGVTVDLQPIEKLNARFLRLNPDLALCVDENGLWLSAN----GMKMQPDWKA--EIPRLKRASLKSEMIARACQLGEK--PVLVDATAGLGHDSLLMAYLGAQIQLVERHPILFTLLEDSKAQAQRDPFLS-QFMDRIQLIFADSASYLKQLDQEEKTVDVVYLDPMFPQRDQNQQAIKKQAQVKKQMQLLHLLLPEDGEMDLGGHLLELAK-KVAKRVIVKRPRHAIFLANQEPAHQWQGDACRFDAYFQ
2OYR Chain:A ((31-247))-----------------------------------------------------------NLMALVLTPEHLELRKRDEPKLGGIFVDFVGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTD---ITPRPQVVYLDPMFPHK-------QK-----KEMRVFQSLVGPD---LDADGLLEPARLLATKRVVVKRPDYAPPLANVATPNAVVTKGHRFDIYAG


General information:
TITO was launched using:
RESULT:

Template: 2OYR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1020 6726 6.59 33.30
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : 6.59
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.433

(partial model without unconserved sides chains):
PDB file : Tito_2OYR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OYR-query.scw
PDB file : Tito_Scwrl_2OYR.pdb: