Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKKGVFYIGAVLMVGCTTLPDHSAPKEKTPPVSEKKKSESSSGVKITPYDHPEIQRKSLQVI------APQQKKPQRFNDDGSQLPAFKTLMQKTEQAY--KNQQWSEAERYALQAQRLAPQAAETYLFLAL-TANHKQQYSNAESLARRGLSFAQSQAMKKQLWLVILKAGQQRNNPKTVQEAQQALKAF
2WIN Chain:A ((134-270))-----------LLPVGRTVMVNIENP-EGIPVKQDSLSSQNQLGVLPLSWDIPELVNMGQWKIRAYYENSPQQVFSTEFEVKEYVLPSFEVIVEPTEKFYYIYNEKGLEV---TITARFLYGKKVEGTAFVIFGIQDGEQRISLPESLKR------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2WIN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 302 21485 71.14 170.51
target 2D structure prediction score : 0.28
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 71.14
2D Compatibility (Sec. Struct. Predict.) : 0.28
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.060

(partial model without unconserved sides chains):
PDB file : Tito_2WIN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2WIN-query.scw
PDB file : Tito_Scwrl_2WIN.pdb: