Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MEERFDWMTFGDDVSGAQAGSAAPPSTGADEDVPIFLREDVGMVRAGASHATAASESTGVDSENGAPAFLAVCPGADVAPRLSGGWSSEGSPVWDGSLRQQQKPSSTAALGHPGGAGDVQAAPSAALYADQPSAAVLHFTGDSGRSWGALHRVRILGKGSYGCATLYSMKDAASGGVEPTHAVVVKDINMQTMLNPAEEVLAVQNELKVLRTVLGHPNLVQYVDALFDTRPPTYPMSFIMMEYCAGGDLAAVMDGRRSDSATTNGAPSSPPSIPLAITTASTAAGPDILTEPC-----VASLFIQVAVALQSLHTEYGILHRDVKPHNIFLLEDGITVRLGDFGISTQLDRVGDTAKEACGSPYYMAPELFEERAYGAAADVWSLGVVFYQLIARQLPFTAASAAELRSL-VCRGRCTPLHDLQNEAASRYSRQFKELVSSLLTVDAAARPTLRRVLRHKYVRESLKYVPASVLTAKKPLPPARVPSAGAMPSSSLQRFSADGLYAGLFGSDVVEQAVSQAVHAGVYPIVSRVHSA 1YHV Chain:A ((263-522)) -------------------------------------------------------------------------------------------------------------------------------------------VGDPKKKYTRFEKI---GQGASG--TVYTAMDVATG-----QEVAIRQMNLQQ--QPKKELII--NEILVMREN-KNPNIVNYLDSYL-----VGDELWVVMEYLAGGSLT------------------------------------DVVTETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP--LRALYLIATNGTP--ELQN--PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK-------------------------------------------------------------------------

General information: TITO was launched using: RESULT: Template: 1YHV.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1218 -53318 -43.78 -209.91 target 2D structure prediction score : 0.63 Monomeric hydrophicity matching model chain A : 0.66 3D Compatibility (PKB) : -43.78 2D Compatibility (Sec. Struct. Predict.) : 0.63 1D Compatibility (Hydrophobicity) : 0.66 QMean score : 0.437

(partial model without unconserved sides chains): PDB file : Tito_1YHV.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1YHV-query.scw PDB file : Tito_Scwrl_1YHV.pdb: