Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPSSSSVTQPEPEATQGIELPACARKPRDPDFEAPASLHAQSKESNPLVLAPPPCPIICPEHERKMRRTSKSCIVPPPRQRQFMGDVVGLKVPDLVTGWKLPRKSSAHRCFLAAGGDVTVEPQPSSLAGANTKCPVRVPACAGSPTCGPRGENGVLIVSQDDRPAGLVNSRRRYSKESKPAVNGEDGVLLSEYEEDSADAAVRQTVARVRSKNCVLLIVLLVIIIVLAVAGGVGVGFVNKHYTTLTHRMYLESGERIVLNSSVMLLKNYHETLRADARHLLSFVRSSMIGRKPESIAVVQSTLYLPFFEAWSTWLFSSNVPSTHSIYVSMCGEPLANTVDCPFMALTIVCMPNVLQAACFYMHSDEVDRSRMIVNRIEVNESGIPRIGAFYKYVPLKVNYAHYQTNNDYGYFLDQDCAASLDGKVHTTLTIRRQIVVGDLVIICDASGFFERWFQRFEKGLQKKKDSHSVLFVNDGTVLAYDCGAPPRHRHVVSPCSMRLVPHKMGDCMAGKADMIDRIVDTFTVAMQRNKLMKRGGLSKDHVALTERVGDYIVVYQDFLSFRVGDGEPKTVFIAAYAVPLDTSLGRDGFVQISICVVIIIICMFLLGGVAMVAVNQMMRVVEVISQLSTHAATYDTKRMRSVLDRQKPGMLARVITSADIINCEFQHILTNLNAYRPFLPQSLLTKSSYSFSDEPLEPPSLWRSDVALGGSAADDVVVDEDGVPAKPLPRFHLKNTLEGSVSNPVENWRLLQRGFHRTKSTILVVSLSNVALDAGESVDAVNLFVQTVLNHAAIANGVVEVIEFQKIVVSFNSHFPVPRHQEKACLCALAIREEFRDRGCSISIGIASGYNYVGTTGTEQQKARVIMGESVVVAQSLTSLKNYLGCSILATDQVVFEALVTAVAVDVVQLYYEHNHQWVQYGVSEIIGNRYAVLSPDMQLVKSVFKLVRYRQAEEALEAVRRYVDAAAERRETPSWPVRRIHALVERQQLLIRSGYRRQRLQWQALEGDEIIMKHLSEENQSYNSKRQPRLMATVSTATVDSLATLSTHAKAAPCEFGFVSGDVLNAGSEAELARALVGEQSKLSMTRRQLAPIPSSCFSEDALFPVFTVKSSDGDEEERSPGSSRLSSQHNRVTDGNAEASGADSEEMRPVLLVEPQTLRSEERHDVRIGALLPPFTVTTSSPFLPAHDMEYPCTTAGISSMLSNSRRHSALDRQRHIAPTPLHDGTCHASTYATSGALGGVSGGKSSIGASLATTSAGNLGRTADSALKQSSENVAGLAKMHCSYKLPQRIVSVNGQVFHRTSQLVGRGSFGEVYVAISETGSLGAMKVFPLNDNNAP---QLIREVETLSQMRHENIVGYDCCAVQDNFFFIICEYLAAGTLGSLIQKLGV---IPERAARKYACDMLFGLGYLHQHS--WLHCDIKPENILVTSDGTCKLADFGAASLGRSLTDAVSVRGTPRFSAPEAILGT-WNQQADIYSFGITVAQMVTGVHPWHKYTEPDHLFVAHYAGEIRHSLQTGMPCAMQPDLPTNLQDKELESAIHRCCEFDPARRPTAEELVTLLS
3P86 Chain:A ((45-293))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IGAGSFGTVHRA-EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDF----------------GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN-PAQVVAA-----------VGFKCK-RLEIPRNL-NPQVAAIIEGCWTNEPWKRPSFATIMDLL-


General information:
TITO was launched using:
RESULT:

Template: 3P86.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1004 -7749 -7.72 -34.75
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -7.72
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.502

(partial model without unconserved sides chains):
PDB file : Tito_3P86.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3P86-query.scw
PDB file : Tito_Scwrl_3P86.pdb: