Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNSLSEANTKFMFDLFQQFRKS-KENNIFYSPISITSALGMVLLGAKDNTAQQISKVLHFDQVTENTTEKAATYHVDRSGNVHHQFQKLLTEFNKSTDAYELKIANKLFGEKTYQFLQEYLDAIKKFYQTSVESTDFANAPEESRKKINSWVESQTNEKIKNLFPDGTIGNDTTLVLVNAIYFKGQWENKFKKENTKEEKFWPNKNTYKSVQMMRQYNSFNFALLEDVQAKVLEIPYKGKDLSMIVLLPNEIDGLQKLEEKLTAEKLMEWTSLQNMRETCVDLHLPRFKMEESYDLKDTLRTMGMVNIFNGDADLSGMTWSHGLSVSKVLHKAFVEVTEEGVEAAAATAVVVVELSSPSTNEEFCCNHPFLFFIRQNKTNSILFYGRFSSP
5CE0 Chain:A ((19-378))-HKLAEANTDFAFSLYRELAKSSPDKNIFFSPVSISSALAMLSLGAKGDTHTQILEGLGFNS----------------EADIHQGFQHLLQTLNRPK-GLQLKTANGLFVDKSLKLLDSFLEDSKKLYQAEAFSVDFD--PEEAKKQINDWVEKQTNGKIKDLLKD--LDSDTVLVLVNAIYFKGKWKKPFDPENTKEEDFHVDEKTTVKVPMMSQKGKFYYYHDDELSCKVLELPYKG-NASMLIILPDE-GGLQHLEQSLTPETLSKW--LKSLTRRSVELYLPKFKIEGTYDLKEVLSNLGITDLFSPGADLSGIT-EEKLYVSKAVHKAVLEVN---------------PRSPP----EFKADRPFLFLIRENKTGSILFMGKVVNP


General information:
TITO was launched using:
RESULT:

Template: 5CE0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1901 63387 33.34 184.26
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : 33.34
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.504

(partial model without unconserved sides chains):
PDB file : Tito_5CE0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5CE0-query.scw
PDB file : Tito_Scwrl_5CE0.pdb: