Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMAAMETETAPLTLESLPTDPLLLILSFLDYRDLINCCYVSRRLSQLSSHDPLWRRHCKKYWLISEEEKTQKNQCWKSLFIDTYSDVGRYIDHYAAIKKAWDDLKKYLEPRCPRMVLSLKEGAREEDLDAVEAQIGCKLPDDYRCS--------YRIHNGQKLVVPGLLGSMAL--SNHYRSEDLLDVDTAAGGFQQRQG---LKYCLPLTFC------IHTGLSQYIAVEAAEGRN--------------KNEVFYQCPDQMARNPAAID-MFIIGATFTDWFTSYVKNVVSGGFPIIRDQIFRYVHDPECVATTGDITVSVSTSFLPELSSVHPPHYFFTYRIRIEMSKDALPEKACQLDSRYWRITNAKGDVEEVQGPGVVGEFPIISPGRVYEYTSCTTFSTTSGYMEGYYTFHFLYFKDKIFNVAIPRFHMACPTFRVSIARLEMGPDEYEEMEEEEEEEEEEDEDDDSADMDESDEDDEEERRRRVFDVPIRRRRCSRLF
5MGB Chain:A ((515-701))---------------------------------------------------------------------------------------------------------------------LEEGSKPEDVDGVLEEFGFKM-GPFRVSDLAGLDVGWKIRKGQGLTGPSLPPGTPVRKRGNSRYSPLGDMLCEAGRFGQKTGKGWYQYDKPLGRIHKPDPWLSTFLSQYREVHHIEQRTISKEEILERCLYSLINEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYAASVGLPTVLEKLQKY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5MGB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 519 21753 41.91 142.17
target 2D structure prediction score : 0.41
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 41.91
2D Compatibility (Sec. Struct. Predict.) : 0.41
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.061

(partial model without unconserved sides chains):
PDB file : Tito_5MGB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5MGB-query.scw
PDB file : Tito_Scwrl_5MGB.pdb: