Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSVGFIGAGQLAFALAKGFTAAGVLAAHKI---MASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVKPHIIPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRCMTNTPVVVREGATVYATGTHAQVEDGRLMEQLLSSVGFCTEVEEDLIDAVTGLSGSGPAYAFTALDALADGGVKMGLPRRLAVRLGAQALLGAAKMLLHSEQHPGQLKDNVSSPGGATIHALHVLESGGFRSLLINAVEASCIRTRELQSMADQEQVSPAAIKKTILDKVKLDSPAGTALSPSGHTKLLPRSLAPAGKD
5BSG Chain:A ((15-276))-TLGFIGAGKMAESIAKGAVRSGVLSPSRIKTAIHSNP----ARRTAFESIGITVLSSNDDVVRDSNVVVFSVKPQLLKDVVLKLKPLLTKDKLLVSVAAGIKM----KDLQEWAGHERFIRVMPNTAATVGEAASVMSLGGAATEEDANLISQLFGSIGKIWKADDKYFDAITGLSGSGPAYIYLAIEALADGGVAAGLPRDLALSLASQTVLGAASMATQSGKHPGQLKDDVTSPGGTTIAGVHELEKAGFRGILMNAVVAAAKRSQEL---------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5BSG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1098 -61381 -55.90 -236.99
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -55.90
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.344

(partial model without unconserved sides chains):
PDB file : Tito_5BSG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5BSG-query.scw
PDB file : Tito_Scwrl_5BSG.pdb: