Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEVPPPAPRSFLCRALCLFPRVFAAEAVTADSEVLEERQKRLPYVPEPYYPESGWDRLRELFGKDEQQRISKDLANICKTAATAGIIGWVYGGIPAFIHAKQQYIEQSQAEIYHNRFDAVQSAHRAATRGFIRYGWRWGWRTAVFVTIFNTVNTSLNVYRNK-DALSHFVIAGAVTGSLFRINVGL-RGLVAGGIIGALLGTPVGGLLMAFQKYSGETVQERKQKDRKALHELKLEEWKGRLQVTEHLPEKIESSLQEDEPENDAKKIEALLNLPRNPSVIDKQDKD
5XTD Chain:V ((12-113))----------------------------------------------------------------------IPDGTDCHRKAYSTTSIASVAGLTAAAYRVTLN--PPG---T--------------FLEG-VAKVGQYTFTAAAVGAVFGLTTCISAHVREKPDDPLNYFLGGCAGGLTLGARTHNYGIGAA-----------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5XTD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain V - contact count / total energy / energy per contact / energy per residue : 310 -16122 -52.00 -161.22
target 2D structure prediction score : 0.27
Monomeric hydrophicity matching model chain V : 0.62

3D Compatibility (PKB) : -52.00
2D Compatibility (Sec. Struct. Predict.) : 0.27
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.156

(partial model without unconserved sides chains):
PDB file : Tito_5XTD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5XTD-query.scw
PDB file : Tito_Scwrl_5XTD.pdb: