Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceWFFRSQGRKEAERQLLAPINKAGSFLIRESETNKGAFSLSVKDVT-TQGELIKHYKIRCLDEGGYYISPRITFPSLQALVQHY
4D8K Chain:A ((76-158))WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELVRHY


General information:
TITO was launched using:
RESULT:

Template: 4D8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 287 -12158 -42.36 -148.27
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.93

3D Compatibility (PKB) : -42.36
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.93
QMean score : 0.637

(partial model without unconserved sides chains):
PDB file : Tito_4D8K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4D8K-query.scw
PDB file : Tito_Scwrl_4D8K.pdb: